Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
Ube3bQ9ES34 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ube3bQ9ES34 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ube3bQ9ES34 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ube3bQ9ES34 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Ube3bQ9ES34 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ube3bQ9ES34 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.08■□□□□ 0.64
Ube3bQ9ES34 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Ube3bQ9ES34 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ube3bQ9ES34 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ube3bQ9ES34 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ube3bQ9ES34 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ube3bQ9ES34 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ube3bQ9ES34 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ube3bQ9ES34 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ube3bQ9ES34 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Gm6257-201ENSMUST00000163864 910 ntBASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Gm10060-201ENSMUST00000212002 111 ntBASIC19.07■□□□□ 0.64
Ube3bQ9ES34 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ube3bQ9ES34 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.06■□□□□ 0.64
Ube3bQ9ES34 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ube3bQ9ES34 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Gm6089-201ENSMUST00000197666 938 ntBASIC19.05■□□□□ 0.64
Ube3bQ9ES34 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ube3bQ9ES34 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ube3bQ9ES34 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube3bQ9ES34 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube3bQ9ES34 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Ube3bQ9ES34 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ube3bQ9ES34 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ube3bQ9ES34 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.04■□□□□ 0.64
Ube3bQ9ES34 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.04■□□□□ 0.64
Ube3bQ9ES34 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube3bQ9ES34 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube3bQ9ES34 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms