Protein–RNA interactions for Protein: Q9EPE9

Atp13a1, Manganese-transporting ATPase 13A1, mousemouse

Known RBP Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a1Q9EPE9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a1Q9EPE9 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.34■□□□□ 0.37
Atp13a1Q9EPE9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.34■□□□□ 0.37
Atp13a1Q9EPE9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a1Q9EPE9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a1Q9EPE9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a1Q9EPE9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a1Q9EPE9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a1Q9EPE9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Atp13a1Q9EPE9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a1Q9EPE9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a1Q9EPE9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a1Q9EPE9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a1Q9EPE9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atp13a1Q9EPE9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Atp13a1Q9EPE9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Atp13a1Q9EPE9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atp13a1Q9EPE9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atp13a1Q9EPE9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Atp13a1Q9EPE9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atp13a1Q9EPE9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Atp13a1Q9EPE9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atp13a1Q9EPE9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Gm13418-201ENSMUST00000119097 944 ntBASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a1Q9EPE9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Gm25990-201ENSMUST00000102440 86 ntBASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Gm10060-201ENSMUST00000212002 111 ntBASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a1Q9EPE9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.31■□□□□ 0.36
Atp13a1Q9EPE9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a1Q9EPE9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a1Q9EPE9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a1Q9EPE9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp13a1Q9EPE9 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.3■□□□□ 0.36
Atp13a1Q9EPE9 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.3■□□□□ 0.36
Atp13a1Q9EPE9 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.3■□□□□ 0.36
Atp13a1Q9EPE9 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.3■□□□□ 0.36
Atp13a1Q9EPE9 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.3■□□□□ 0.36
Atp13a1Q9EPE9 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms