Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Gm18671-201ENSMUST00000214826 683 ntBASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ap3s1Q9DCR2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ap3s1Q9DCR2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ap3s1Q9DCR2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Gm26524-201ENSMUST00000192339 390 ntBASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Gm10033-202ENSMUST00000211874 928 ntBASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ap3s1Q9DCR2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms