Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Gm15794-201ENSMUST00000120182 631 ntBASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Gm29707-201ENSMUST00000196325 491 ntBASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdc40Q9DC48 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdc40Q9DC48 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdc40Q9DC48 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cdc40Q9DC48 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cdc40Q9DC48 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms