Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Stag1Q9D3E6 Haglr-201ENSMUST00000100000 2085 ntBASIC19.1■□□□□ 0.65
Stag1Q9D3E6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Stag1Q9D3E6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Stag1Q9D3E6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Stag1Q9D3E6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.1■□□□□ 0.65
Stag1Q9D3E6 Gm5264-201ENSMUST00000190584 848 ntBASIC19.1■□□□□ 0.65
Stag1Q9D3E6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.1■□□□□ 0.65
Stag1Q9D3E6 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.1■□□□□ 0.65
Stag1Q9D3E6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Stag1Q9D3E6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Stag1Q9D3E6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.1■□□□□ 0.65
Stag1Q9D3E6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Stag1Q9D3E6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Stag1Q9D3E6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Stag1Q9D3E6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Stag1Q9D3E6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Stag1Q9D3E6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Gm7222-201ENSMUST00000117512 906 ntBASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Gm11594-201ENSMUST00000122313 162 ntBASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Gm27628-201ENSMUST00000184911 107 ntBASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Gm18622-201ENSMUST00000219361 595 ntBASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Stag1Q9D3E6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Stag1Q9D3E6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Stag1Q9D3E6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Stag1Q9D3E6 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Gm8825-201ENSMUST00000182565 998 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Gm4518-201ENSMUST00000182638 718 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Stag1Q9D3E6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Stag1Q9D3E6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Stag1Q9D3E6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Stag1Q9D3E6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Stag1Q9D3E6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Stag1Q9D3E6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Stag1Q9D3E6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Stag1Q9D3E6 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.07■□□□□ 0.64
Stag1Q9D3E6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.07■□□□□ 0.64
Stag1Q9D3E6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Stag1Q9D3E6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Stag1Q9D3E6 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.07■□□□□ 0.64
Stag1Q9D3E6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.07■□□□□ 0.64
Stag1Q9D3E6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Stag1Q9D3E6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Stag1Q9D3E6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Stag1Q9D3E6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.07■□□□□ 0.64
Stag1Q9D3E6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Stag1Q9D3E6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Stag1Q9D3E6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Stag1Q9D3E6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms