Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1aQ9D132 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.26■□□□□ 0.03
Upk1aQ9D132 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1aQ9D132 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.24■□□□□ 0.03
Upk1aQ9D132 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.24■□□□□ 0.03
Upk1aQ9D132 Mir5122-201ENSMUST00000175004 89 ntBASIC15.24■□□□□ 0.03
Upk1aQ9D132 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.24■□□□□ 0.03
Upk1aQ9D132 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.24■□□□□ 0.03
Upk1aQ9D132 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Upk1aQ9D132 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.24■□□□□ 0.03
Upk1aQ9D132 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1aQ9D132 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.23■□□□□ 0.03
Upk1aQ9D132 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Upk1aQ9D132 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms