Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Gm12742-201ENSMUST00000117326 410 ntBASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Gm15321-201ENSMUST00000121290 288 ntBASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Gm14767-201ENSMUST00000121559 586 ntBASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Gm25144-201ENSMUST00000179561 110 ntBASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Gm25352-201ENSMUST00000179815 110 ntBASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Gm9257-201ENSMUST00000221254 232 ntBASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd1Q9D0E3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Gm9824-201ENSMUST00000178707 561 ntBASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Gm45841-201ENSMUST00000207700 164 ntBASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Gm18246-201ENSMUST00000221023 728 ntBASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Lysmd1Q9D0E3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Gm16198-201ENSMUST00000118766 670 ntBASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd1Q9D0E3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd1Q9D0E3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd1Q9D0E3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd1Q9D0E3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Lysmd1Q9D0E3 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.1■□□□□ 0.33
Lysmd1Q9D0E3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.1■□□□□ 0.33
Lysmd1Q9D0E3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.1■□□□□ 0.33
Lysmd1Q9D0E3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.1■□□□□ 0.33
Lysmd1Q9D0E3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd1Q9D0E3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lysmd1Q9D0E3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.1■□□□□ 0.33
Lysmd1Q9D0E3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd1Q9D0E3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.1■□□□□ 0.33
Lysmd1Q9D0E3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd1Q9D0E3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms