Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Actl10-202ENSMUST00000226583 1501 ntBASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.46■□□□□ 0.39
Ssr1Q9CY50 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ssr1Q9CY50 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.46■□□□□ 0.38
Ssr1Q9CY50 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ssr1Q9CY50 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Ssr1Q9CY50 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssr1Q9CY50 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.45■□□□□ 0.38
Ssr1Q9CY50 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Gm13186-201ENSMUST00000118031 316 ntBASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Gm2274-201ENSMUST00000184539 609 ntBASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Gm7370-201ENSMUST00000219471 767 ntBASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Ssr1Q9CY50 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Gm11539-201ENSMUST00000119837 557 ntBASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssr1Q9CY50 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssr1Q9CY50 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ssr1Q9CY50 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms