Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg3Q9CQV4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg3Q9CQV4 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg3Q9CQV4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.16■□□□□ 0.18
Retreg3Q9CQV4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.16■□□□□ 0.18
Retreg3Q9CQV4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg3Q9CQV4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Retreg3Q9CQV4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.16■□□□□ 0.18
Retreg3Q9CQV4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Retreg3Q9CQV4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg3Q9CQV4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg3Q9CQV4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Retreg3Q9CQV4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg3Q9CQV4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg3Q9CQV4 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg3Q9CQV4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Retreg3Q9CQV4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Gm13312-201ENSMUST00000119631 718 ntBASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Retreg3Q9CQV4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Retreg3Q9CQV4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Gm43514-201ENSMUST00000198852 424 ntBASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 AC154634.3-201ENSMUST00000224589 736 ntBASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Mzt1-203ENSMUST00000227948 952 ntBASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retreg3Q9CQV4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms