Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Gm7290-201ENSMUST00000104990 617 ntBASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Gm12918-201ENSMUST00000120234 636 ntBASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Gm15710-201ENSMUST00000121821 636 ntBASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Gm5075-201ENSMUST00000196916 622 ntBASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl54Q9CPW3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl54Q9CPW3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Gm26524-201ENSMUST00000192339 390 ntBASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl54Q9CPW3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl54Q9CPW3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl54Q9CPW3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Mrpl54Q9CPW3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Mrpl54Q9CPW3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Mrpl54Q9CPW3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl54Q9CPW3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl54Q9CPW3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Mrpl54Q9CPW3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl54Q9CPW3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl54Q9CPW3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl54Q9CPW3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl54Q9CPW3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl54Q9CPW3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl54Q9CPW3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms