Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim16Q99PP9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.75■□□□□ 0.11
Trim16Q99PP9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Gm6659-201ENSMUST00000174752 547 ntBASIC15.75■□□□□ 0.11
Trim16Q99PP9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim16Q99PP9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.74■□□□□ 0.11
Trim16Q99PP9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim16Q99PP9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.74■□□□□ 0.11
Trim16Q99PP9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim16Q99PP9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Gm18115-201ENSMUST00000221209 621 ntBASIC15.73■□□□□ 0.11
Trim16Q99PP9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Trim16Q99PP9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.72■□□□□ 0.11
Trim16Q99PP9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms