Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cdh23Q99PF4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cdh23Q99PF4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh23Q99PF4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh23Q99PF4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh23Q99PF4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh23Q99PF4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.32■□□□□ 0.2
Cdh23Q99PF4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Cdh23Q99PF4 Gm12151-201ENSMUST00000121374 290 ntBASIC16.32■□□□□ 0.2
Cdh23Q99PF4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh23Q99PF4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh23Q99PF4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh23Q99PF4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh23Q99PF4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh23Q99PF4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.31■□□□□ 0.2
Cdh23Q99PF4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh23Q99PF4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.31■□□□□ 0.2
Cdh23Q99PF4 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.31■□□□□ 0.2
Cdh23Q99PF4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh23Q99PF4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh23Q99PF4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh23Q99PF4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh23Q99PF4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cdh23Q99PF4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh23Q99PF4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh23Q99PF4 Gm10253-201ENSMUST00000194270 940 ntBASIC16.31■□□□□ 0.2
Cdh23Q99PF4 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.31■□□□□ 0.2
Cdh23Q99PF4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh23Q99PF4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh23Q99PF4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh23Q99PF4 Gm25287-201ENSMUST00000103846 110 ntBASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Gm22918-201ENSMUST00000103855 110 ntBASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Gm18187-201ENSMUST00000196476 984 ntBASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh23Q99PF4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh23Q99PF4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.28■□□□□ 0.2
Cdh23Q99PF4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh23Q99PF4 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.28■□□□□ 0.2
Cdh23Q99PF4 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh23Q99PF4 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.28■□□□□ 0.2
Cdh23Q99PF4 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh23Q99PF4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh23Q99PF4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh23Q99PF4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh23Q99PF4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cdh23Q99PF4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh23Q99PF4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh23Q99PF4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh23Q99PF4 Rpph1-201ENSMUST00000175096 319 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms