Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 Gm2423-201ENSMUST00000074863 733 ntBASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col25a1Q99MQ5 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Gm13365-201ENSMUST00000121188 973 ntBASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Mir1938-201ENSMUST00000158746 100 ntBASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Gm44492-201ENSMUST00000197012 141 ntBASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col25a1Q99MQ5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Col25a1Q99MQ5 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.61■□□□□ 0.25
Col25a1Q99MQ5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col25a1Q99MQ5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Col25a1Q99MQ5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col25a1Q99MQ5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.61■□□□□ 0.25
Col25a1Q99MQ5 Gm29707-201ENSMUST00000196325 491 ntBASIC16.61■□□□□ 0.25
Col25a1Q99MQ5 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.61■□□□□ 0.25
Col25a1Q99MQ5 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.61■□□□□ 0.25
Col25a1Q99MQ5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col25a1Q99MQ5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col25a1Q99MQ5 Gm9899-201ENSMUST00000065519 555 ntBASIC16.61■□□□□ 0.25
Col25a1Q99MQ5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col25a1Q99MQ5 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col25a1Q99MQ5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Col25a1Q99MQ5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Col25a1Q99MQ5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col25a1Q99MQ5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col25a1Q99MQ5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col25a1Q99MQ5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.6■□□□□ 0.25
Col25a1Q99MQ5 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col25a1Q99MQ5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Col25a1Q99MQ5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col25a1Q99MQ5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col25a1Q99MQ5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Col25a1Q99MQ5 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col25a1Q99MQ5 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col25a1Q99MQ5 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.6■□□□□ 0.25
Col25a1Q99MQ5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col25a1Q99MQ5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Col25a1Q99MQ5 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.6■□□□□ 0.25
Col25a1Q99MQ5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.6■□□□□ 0.25
Col25a1Q99MQ5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Col25a1Q99MQ5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Col25a1Q99MQ5 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col25a1Q99MQ5 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col25a1Q99MQ5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Col25a1Q99MQ5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col25a1Q99MQ5 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col25a1Q99MQ5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Col25a1Q99MQ5 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.59■□□□□ 0.25
Col25a1Q99MQ5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col25a1Q99MQ5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col25a1Q99MQ5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.59■□□□□ 0.25
Col25a1Q99MQ5 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.59■□□□□ 0.25
Col25a1Q99MQ5 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col25a1Q99MQ5 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col25a1Q99MQ5 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col25a1Q99MQ5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col25a1Q99MQ5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col25a1Q99MQ5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms