Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf111Q99ML9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf111Q99ML9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf111Q99ML9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf111Q99ML9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf111Q99ML9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf111Q99ML9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf111Q99ML9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf111Q99ML9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Rnf111Q99ML9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Rnf111Q99ML9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.62■□□□□ 0.09
Rnf111Q99ML9 Mir1668-201ENSMUST00000184114 107 ntBASIC15.62■□□□□ 0.09
Rnf111Q99ML9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rnf111Q99ML9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rnf111Q99ML9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf111Q99ML9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rnf111Q99ML9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf111Q99ML9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf111Q99ML9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf111Q99ML9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf111Q99ML9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf111Q99ML9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf111Q99ML9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rnf111Q99ML9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf111Q99ML9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf111Q99ML9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rnf111Q99ML9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf111Q99ML9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf111Q99ML9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf111Q99ML9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Rnf111Q99ML9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Rnf111Q99ML9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms