Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 Gm11452-201ENSMUST00000122376 690 ntBASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd3Q99LE3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Gm7506-201ENSMUST00000207758 815 ntBASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd3Q99LE3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Lysmd3Q99LE3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Lysmd3Q99LE3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd3Q99LE3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Mzt1-203ENSMUST00000227948 952 ntBASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms