Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcd2Q99JR8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Smarcd2Q99JR8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
Smarcd2Q99JR8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcd2Q99JR8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.21■□□□□ 0.19
Smarcd2Q99JR8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcd2Q99JR8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcd2Q99JR8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Smarcd2Q99JR8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Smarcd2Q99JR8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Smarcd2Q99JR8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcd2Q99JR8 Gm37153-201ENSMUST00000193637 231 ntBASIC16.21■□□□□ 0.19
Smarcd2Q99JR8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.21■□□□□ 0.19
Smarcd2Q99JR8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.21■□□□□ 0.19
Smarcd2Q99JR8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcd2Q99JR8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcd2Q99JR8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcd2Q99JR8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcd2Q99JR8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Gm45167-201ENSMUST00000208007 322 ntBASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcd2Q99JR8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Gm26308-201ENSMUST00000157768 69 ntBASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms