Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc1bQ920F6 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smc1bQ920F6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smc1bQ920F6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smc1bQ920F6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Smc1bQ920F6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc1bQ920F6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc1bQ920F6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc1bQ920F6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc1bQ920F6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc1bQ920F6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc1bQ920F6 Gm15467-201ENSMUST00000120582 445 ntBASIC18.51■□□□□ 0.55
Smc1bQ920F6 Mir5126-201ENSMUST00000175513 77 ntBASIC18.51■□□□□ 0.55
Smc1bQ920F6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.51■□□□□ 0.55
Smc1bQ920F6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Smc1bQ920F6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Smc1bQ920F6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc1bQ920F6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc1bQ920F6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Smc1bQ920F6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc1bQ920F6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smc1bQ920F6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Smc1bQ920F6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Smc1bQ920F6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.51■□□□□ 0.55
Smc1bQ920F6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc1bQ920F6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smc1bQ920F6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Gm7063-201ENSMUST00000186840 981 ntBASIC18.5■□□□□ 0.55
Smc1bQ920F6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc1bQ920F6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.5■□□□□ 0.55
Smc1bQ920F6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc1bQ920F6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc1bQ920F6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Gm2756-201ENSMUST00000195851 400 ntBASIC18.49■□□□□ 0.55
Smc1bQ920F6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc1bQ920F6 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.49■□□□□ 0.55
Smc1bQ920F6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc1bQ920F6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.48■□□□□ 0.55
Smc1bQ920F6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc1bQ920F6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.48■□□□□ 0.55
Smc1bQ920F6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Smc1bQ920F6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smc1bQ920F6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Smc1bQ920F6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc1bQ920F6 Gm29707-201ENSMUST00000196325 491 ntBASIC18.48■□□□□ 0.55
Smc1bQ920F6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smc1bQ920F6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smc1bQ920F6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc1bQ920F6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc1bQ920F6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Smc1bQ920F6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc1bQ920F6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc1bQ920F6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Smc1bQ920F6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Smc1bQ920F6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc1bQ920F6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.48■□□□□ 0.55
Smc1bQ920F6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms