Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha9Q91Y11 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha9Q91Y11 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha9Q91Y11 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha9Q91Y11 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha9Q91Y11 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha9Q91Y11 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdha9Q91Y11 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha9Q91Y11 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdha9Q91Y11 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdha9Q91Y11 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pcdha9Q91Y11 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdha9Q91Y11 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha9Q91Y11 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdha9Q91Y11 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha9Q91Y11 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha9Q91Y11 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha9Q91Y11 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdha9Q91Y11 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha9Q91Y11 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Pcdha9Q91Y11 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha9Q91Y11 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha9Q91Y11 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha9Q91Y11 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha9Q91Y11 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha9Q91Y11 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha9Q91Y11 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha9Q91Y11 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha9Q91Y11 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.08■□□□□ 0.33
Pcdha9Q91Y11 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdha9Q91Y11 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha9Q91Y11 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdha9Q91Y11 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Pcdha9Q91Y11 Gm12895-201ENSMUST00000122214 226 ntBASIC17.08■□□□□ 0.32
Pcdha9Q91Y11 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.08■□□□□ 0.32
Pcdha9Q91Y11 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha9Q91Y11 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha9Q91Y11 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha9Q91Y11 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha9Q91Y11 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha9Q91Y11 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha9Q91Y11 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha9Q91Y11 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Gm15165-201ENSMUST00000118140 502 ntBASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha9Q91Y11 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha9Q91Y11 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms