Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.12■□□□□ 0.17
Pcdhb3Q91XZ7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.12■□□□□ 0.17
Pcdhb3Q91XZ7 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.12■□□□□ 0.17
Pcdhb3Q91XZ7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.12■□□□□ 0.17
Pcdhb3Q91XZ7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb3Q91XZ7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb3Q91XZ7 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.12■□□□□ 0.17
Pcdhb3Q91XZ7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhb3Q91XZ7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Timm23-208ENSMUST00000226683 750 ntBASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb3Q91XZ7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Gm43371-201ENSMUST00000202838 1031 ntBASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb3Q91XZ7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Gm6433-201ENSMUST00000118634 875 ntBASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Gm10517-202ENSMUST00000192970 758 ntBASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Gm4974-201ENSMUST00000209974 875 ntBASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb3Q91XZ7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb3Q91XZ7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb3Q91XZ7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb3Q91XZ7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.08■□□□□ 0.17
Pcdhb3Q91XZ7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb3Q91XZ7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhb3Q91XZ7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Pcdhb3Q91XZ7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb3Q91XZ7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 CT009738.1-201ENSMUST00000219031 809 ntBASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms