Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Gm8668-201ENSMUST00000120559 1447 ntBASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Mir6982-201ENSMUST00000184354 68 ntBASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb4Q91XZ6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb4Q91XZ6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Gm29707-201ENSMUST00000196325 491 ntBASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb4Q91XZ6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms