Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.37□□□□□ -0.11
Pcdhga3Q91XY5 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.37□□□□□ -0.11
Pcdhga3Q91XY5 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga3Q91XY5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga3Q91XY5 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga3Q91XY5 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga3Q91XY5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga3Q91XY5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga3Q91XY5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga3Q91XY5 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga3Q91XY5 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga3Q91XY5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga3Q91XY5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga3Q91XY5 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdhga3Q91XY5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga3Q91XY5 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga3Q91XY5 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Gm18032-201ENSMUST00000222541 538 ntBASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga3Q91XY5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Gm10013-201ENSMUST00000106074 672 ntBASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Gm10231-201ENSMUST00000181584 441 ntBASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Gm10175-202ENSMUST00000208752 441 ntBASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdhga3Q91XY5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Mir7071-201ENSMUST00000184847 69 ntBASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Gm29707-201ENSMUST00000196325 491 ntBASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Gm18421-201ENSMUST00000204122 625 ntBASIC14.34□□□□□ -0.11
Pcdhga3Q91XY5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms