Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 Mir770-201ENSMUST00000103252 94 ntBASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb4Q91XX6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb4Q91XX6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Gm10013-201ENSMUST00000106074 672 ntBASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb4Q91XX6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb4Q91XX6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhgb4Q91XX6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.03■□□□□ 0.32
Pcdhgb4Q91XX6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb4Q91XX6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Pcdhgb4Q91XX6 Prob1-201ENSMUST00000097619 3021 ntBASIC17.03■□□□□ 0.32
Pcdhgb4Q91XX6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb4Q91XX6 Gm43416-201ENSMUST00000201916 1015 ntBASIC17.03■□□□□ 0.32
Pcdhgb4Q91XX6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb4Q91XX6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb4Q91XX6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb4Q91XX6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb4Q91XX6 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.03■□□□□ 0.32
Pcdhgb4Q91XX6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Pcdhgb4Q91XX6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb4Q91XX6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhgb4Q91XX6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhgb4Q91XX6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb4Q91XX6 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.02■□□□□ 0.32
Pcdhgb4Q91XX6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb4Q91XX6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhgb4Q91XX6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb4Q91XX6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb4Q91XX6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb4Q91XX6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.02■□□□□ 0.32
Pcdhgb4Q91XX6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb4Q91XX6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.02■□□□□ 0.32
Pcdhgb4Q91XX6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb4Q91XX6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb4Q91XX6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms