Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Gm15378-201ENSMUST00000121894 207 ntBASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgc3Q91XX1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgc3Q91XX1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 Gm37292-201ENSMUST00000192062 758 ntBASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgc3Q91XX1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 Gm5643-201ENSMUST00000117081 966 ntBASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgc3Q91XX1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhgc3Q91XX1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhgc3Q91XX1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms