Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Gm2213-201ENSMUST00000197485 688 ntBASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Mir5126-201ENSMUST00000175513 77 ntBASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgc5Q91XW9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 Gm27702-201ENSMUST00000184512 56 ntBASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.27■□□□□ 0.52
Pcdhgc5Q91XW9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Pcdhgc5Q91XW9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Pcdhgc5Q91XW9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.27■□□□□ 0.51
Pcdhgc5Q91XW9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhgc5Q91XW9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhgc5Q91XW9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhgc5Q91XW9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhgc5Q91XW9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcdhgc5Q91XW9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgc5Q91XW9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgc5Q91XW9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgc5Q91XW9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhgc5Q91XW9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgc5Q91XW9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgc5Q91XW9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
Pcdhgc5Q91XW9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms