Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vsx1Q91V10 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vsx1Q91V10 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vsx1Q91V10 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vsx1Q91V10 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Vsx1Q91V10 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vsx1Q91V10 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Gm4459-201ENSMUST00000118750 468 ntBASIC15.88■□□□□ 0.13
Vsx1Q91V10 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vsx1Q91V10 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Vsx1Q91V10 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.88■□□□□ 0.13
Vsx1Q91V10 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vsx1Q91V10 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Vsx1Q91V10 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.88■□□□□ 0.13
Vsx1Q91V10 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vsx1Q91V10 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vsx1Q91V10 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vsx1Q91V10 Gm7222-201ENSMUST00000117512 906 ntBASIC15.86■□□□□ 0.13
Vsx1Q91V10 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vsx1Q91V10 Gm12497-201ENSMUST00000138778 237 ntBASIC15.86■□□□□ 0.13
Vsx1Q91V10 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.86■□□□□ 0.13
Vsx1Q91V10 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.86■□□□□ 0.13
Vsx1Q91V10 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vsx1Q91V10 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.86■□□□□ 0.13
Vsx1Q91V10 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vsx1Q91V10 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vsx1Q91V10 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vsx1Q91V10 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vsx1Q91V10 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vsx1Q91V10 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vsx1Q91V10 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.86■□□□□ 0.13
Vsx1Q91V10 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
Vsx1Q91V10 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Vsx1Q91V10 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vsx1Q91V10 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.85■□□□□ 0.13
Vsx1Q91V10 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.85■□□□□ 0.13
Vsx1Q91V10 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.85■□□□□ 0.13
Vsx1Q91V10 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.85■□□□□ 0.13
Vsx1Q91V10 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms