Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Gm11355-201ENSMUST00000121120 306 ntBASIC13.5□□□□□ -0.25
H1fooQ8VIK3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Gm9987-201ENSMUST00000069768 567 ntBASIC13.49□□□□□ -0.25
H1fooQ8VIK3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H1fooQ8VIK3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms