Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh18Q8VHR0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdh18Q8VHR0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh18Q8VHR0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh18Q8VHR0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Timm23-208ENSMUST00000226683 750 ntBASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh18Q8VHR0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Pcdh18Q8VHR0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh18Q8VHR0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh18Q8VHR0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh18Q8VHR0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh18Q8VHR0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh18Q8VHR0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms