Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rab40cQ8VHQ4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Gm27275-201ENSMUST00000184318 272 ntBASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab40cQ8VHQ4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Gm12527-201ENSMUST00000117967 564 ntBASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab40cQ8VHQ4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms