Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HnrnpuQ8VEK3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HnrnpuQ8VEK3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
HnrnpuQ8VEK3 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.05■□□□□ 0.8
HnrnpuQ8VEK3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HnrnpuQ8VEK3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HnrnpuQ8VEK3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
HnrnpuQ8VEK3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HnrnpuQ8VEK3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HnrnpuQ8VEK3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HnrnpuQ8VEK3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HnrnpuQ8VEK3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HnrnpuQ8VEK3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HnrnpuQ8VEK3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HnrnpuQ8VEK3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HnrnpuQ8VEK3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HnrnpuQ8VEK3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HnrnpuQ8VEK3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HnrnpuQ8VEK3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HnrnpuQ8VEK3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HnrnpuQ8VEK3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.04■□□□□ 0.8
HnrnpuQ8VEK3 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.04■□□□□ 0.8
HnrnpuQ8VEK3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HnrnpuQ8VEK3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HnrnpuQ8VEK3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HnrnpuQ8VEK3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HnrnpuQ8VEK3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HnrnpuQ8VEK3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HnrnpuQ8VEK3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HnrnpuQ8VEK3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HnrnpuQ8VEK3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HnrnpuQ8VEK3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HnrnpuQ8VEK3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HnrnpuQ8VEK3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HnrnpuQ8VEK3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.02■□□□□ 0.8
HnrnpuQ8VEK3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.02■□□□□ 0.8
HnrnpuQ8VEK3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HnrnpuQ8VEK3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
HnrnpuQ8VEK3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HnrnpuQ8VEK3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.02■□□□□ 0.8
HnrnpuQ8VEK3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
HnrnpuQ8VEK3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HnrnpuQ8VEK3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HnrnpuQ8VEK3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HnrnpuQ8VEK3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HnrnpuQ8VEK3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HnrnpuQ8VEK3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HnrnpuQ8VEK3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HnrnpuQ8VEK3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HnrnpuQ8VEK3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HnrnpuQ8VEK3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HnrnpuQ8VEK3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HnrnpuQ8VEK3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HnrnpuQ8VEK3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HnrnpuQ8VEK3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HnrnpuQ8VEK3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC20.01■□□□□ 0.79
HnrnpuQ8VEK3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.01■□□□□ 0.79
HnrnpuQ8VEK3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HnrnpuQ8VEK3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC20.01■□□□□ 0.79
HnrnpuQ8VEK3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HnrnpuQ8VEK3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HnrnpuQ8VEK3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HnrnpuQ8VEK3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HnrnpuQ8VEK3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HnrnpuQ8VEK3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HnrnpuQ8VEK3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HnrnpuQ8VEK3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HnrnpuQ8VEK3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.01■□□□□ 0.79
HnrnpuQ8VEK3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HnrnpuQ8VEK3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HnrnpuQ8VEK3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HnrnpuQ8VEK3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HnrnpuQ8VEK3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms