Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Gm10698-201ENSMUST00000182663 604 ntBASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Gm18115-201ENSMUST00000221209 621 ntBASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup35Q8R4R6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nup35Q8R4R6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nup35Q8R4R6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nup35Q8R4R6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nup35Q8R4R6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nup35Q8R4R6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nup35Q8R4R6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Nup35Q8R4R6 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup35Q8R4R6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup35Q8R4R6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nup35Q8R4R6 Gm12441-201ENSMUST00000121806 588 ntBASIC13.14□□□□□ -0.31
Nup35Q8R4R6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.14□□□□□ -0.31
Nup35Q8R4R6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup35Q8R4R6 Gm36967-201ENSMUST00000193814 266 ntBASIC13.14□□□□□ -0.31
Nup35Q8R4R6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.14□□□□□ -0.31
Nup35Q8R4R6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup35Q8R4R6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup35Q8R4R6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup35Q8R4R6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms