Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf4Q8K4J2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf4Q8K4J2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf4Q8K4J2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf4Q8K4J2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf4Q8K4J2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf4Q8K4J2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf4Q8K4J2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf4Q8K4J2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Gm37292-201ENSMUST00000192062 758 ntBASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf4Q8K4J2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ebf4Q8K4J2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.71□□□□□ -0.06
Ebf4Q8K4J2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ebf4Q8K4J2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ebf4Q8K4J2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ebf4Q8K4J2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ebf4Q8K4J2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.7□□□□□ -0.06
Ebf4Q8K4J2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms