Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Mir6349-201ENSMUST00000184059 97 ntBASIC10.14□□□□□ -0.79
Cystm1Q8K353 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Cystm1Q8K353 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC10.13□□□□□ -0.79
Cystm1Q8K353 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Tfap2a-209ENSMUST00000225180 1828 ntBASIC10.13□□□□□ -0.79
Cystm1Q8K353 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Gm715-201ENSMUST00000117865 831 ntBASIC10.13□□□□□ -0.79
Cystm1Q8K353 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cystm1Q8K353 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Mir6982-201ENSMUST00000184354 68 ntBASIC10.12□□□□□ -0.79
Cystm1Q8K353 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Cystm1Q8K353 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cystm1Q8K353 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms