Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox30Q8CGW4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox30Q8CGW4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox30Q8CGW4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox30Q8CGW4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox30Q8CGW4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.59■□□□□ 0.41
Sox30Q8CGW4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox30Q8CGW4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox30Q8CGW4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox30Q8CGW4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox30Q8CGW4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox30Q8CGW4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox30Q8CGW4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Sox30Q8CGW4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sox30Q8CGW4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox30Q8CGW4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox30Q8CGW4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox30Q8CGW4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.58■□□□□ 0.4
Sox30Q8CGW4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.58■□□□□ 0.4
Sox30Q8CGW4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sox30Q8CGW4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox30Q8CGW4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox30Q8CGW4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Sox30Q8CGW4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sox30Q8CGW4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox30Q8CGW4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sox30Q8CGW4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox30Q8CGW4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox30Q8CGW4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox30Q8CGW4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox30Q8CGW4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sox30Q8CGW4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox30Q8CGW4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox30Q8CGW4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox30Q8CGW4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.57■□□□□ 0.4
Sox30Q8CGW4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.57■□□□□ 0.4
Sox30Q8CGW4 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.57■□□□□ 0.4
Sox30Q8CGW4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox30Q8CGW4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox30Q8CGW4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox30Q8CGW4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sox30Q8CGW4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox30Q8CGW4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.56■□□□□ 0.4
Sox30Q8CGW4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Gm37722-201ENSMUST00000193757 208 ntBASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Gm10812-201ENSMUST00000099864 546 ntBASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox30Q8CGW4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms