Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Gm7774-201ENSMUST00000200064 533 ntBASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Gm19164-201ENSMUST00000210667 640 ntBASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rp1l1Q8CGM2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.6■□□□□ 0.25
Rp1l1Q8CGM2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rp1l1Q8CGM2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rp1l1Q8CGM2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rp1l1Q8CGM2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rp1l1Q8CGM2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rp1l1Q8CGM2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Rp1l1Q8CGM2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rp1l1Q8CGM2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rp1l1Q8CGM2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rp1l1Q8CGM2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.6■□□□□ 0.25
Rp1l1Q8CGM2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rp1l1Q8CGM2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.6■□□□□ 0.25
Rp1l1Q8CGM2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Gm43767-201ENSMUST00000198933 381 ntBASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Gm2423-201ENSMUST00000074863 733 ntBASIC16.59■□□□□ 0.25
Rp1l1Q8CGM2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rp1l1Q8CGM2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rp1l1Q8CGM2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rp1l1Q8CGM2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.58■□□□□ 0.24
Rp1l1Q8CGM2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rp1l1Q8CGM2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rp1l1Q8CGM2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rp1l1Q8CGM2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rp1l1Q8CGM2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.58■□□□□ 0.24
Rp1l1Q8CGM2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rp1l1Q8CGM2 Gm10253-201ENSMUST00000194270 940 ntBASIC16.58■□□□□ 0.24
Rp1l1Q8CGM2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.58■□□□□ 0.24
Rp1l1Q8CGM2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rp1l1Q8CGM2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.58■□□□□ 0.24
Rp1l1Q8CGM2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rp1l1Q8CGM2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms