Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ShfQ8CG80 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ShfQ8CG80 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ShfQ8CG80 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ShfQ8CG80 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ShfQ8CG80 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ShfQ8CG80 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ShfQ8CG80 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.37□□□□□ -0.11
ShfQ8CG80 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ShfQ8CG80 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ShfQ8CG80 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.37□□□□□ -0.11
ShfQ8CG80 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ShfQ8CG80 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ShfQ8CG80 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ShfQ8CG80 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ShfQ8CG80 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ShfQ8CG80 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ShfQ8CG80 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ShfQ8CG80 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ShfQ8CG80 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ShfQ8CG80 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.37□□□□□ -0.11
ShfQ8CG80 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.37□□□□□ -0.11
ShfQ8CG80 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ShfQ8CG80 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ShfQ8CG80 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ShfQ8CG80 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ShfQ8CG80 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.36□□□□□ -0.11
ShfQ8CG80 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ShfQ8CG80 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ShfQ8CG80 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ShfQ8CG80 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.36□□□□□ -0.11
ShfQ8CG80 Gm13559-201ENSMUST00000120476 863 ntBASIC14.36□□□□□ -0.11
ShfQ8CG80 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ShfQ8CG80 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.36□□□□□ -0.11
ShfQ8CG80 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.36□□□□□ -0.11
ShfQ8CG80 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.36□□□□□ -0.11
ShfQ8CG80 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.36□□□□□ -0.11
ShfQ8CG80 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ShfQ8CG80 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ShfQ8CG80 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ShfQ8CG80 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ShfQ8CG80 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ShfQ8CG80 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.36□□□□□ -0.11
ShfQ8CG80 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ShfQ8CG80 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ShfQ8CG80 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ShfQ8CG80 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ShfQ8CG80 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ShfQ8CG80 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.35□□□□□ -0.11
ShfQ8CG80 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.35□□□□□ -0.11
ShfQ8CG80 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.35□□□□□ -0.11
ShfQ8CG80 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ShfQ8CG80 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.34□□□□□ -0.11
ShfQ8CG80 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ShfQ8CG80 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ShfQ8CG80 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ShfQ8CG80 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ShfQ8CG80 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ShfQ8CG80 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.34□□□□□ -0.11
ShfQ8CG80 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ShfQ8CG80 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ShfQ8CG80 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ShfQ8CG80 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ShfQ8CG80 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.34□□□□□ -0.11
ShfQ8CG80 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.34□□□□□ -0.11
ShfQ8CG80 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.34□□□□□ -0.11
ShfQ8CG80 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ShfQ8CG80 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ShfQ8CG80 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ShfQ8CG80 Gm27011-201ENSMUST00000182352 972 ntBASIC14.34□□□□□ -0.11
ShfQ8CG80 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ShfQ8CG80 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
ShfQ8CG80 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ShfQ8CG80 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ShfQ8CG80 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ShfQ8CG80 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ShfQ8CG80 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ShfQ8CG80 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ShfQ8CG80 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ShfQ8CG80 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ShfQ8CG80 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ShfQ8CG80 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms