Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Shisa4Q8CA71 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Shisa4Q8CA71 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shisa4Q8CA71 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa4Q8CA71 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa4Q8CA71 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa4Q8CA71 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa4Q8CA71 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.64■□□□□ 0.57
Shisa4Q8CA71 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.64■□□□□ 0.57
Shisa4Q8CA71 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa4Q8CA71 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa4Q8CA71 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.64■□□□□ 0.57
Shisa4Q8CA71 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.64■□□□□ 0.57
Shisa4Q8CA71 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.64■□□□□ 0.57
Shisa4Q8CA71 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Shisa4Q8CA71 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.64■□□□□ 0.57
Shisa4Q8CA71 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.64■□□□□ 0.57
Shisa4Q8CA71 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa4Q8CA71 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa4Q8CA71 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Shisa4Q8CA71 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa4Q8CA71 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa4Q8CA71 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa4Q8CA71 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa4Q8CA71 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.63■□□□□ 0.57
Shisa4Q8CA71 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa4Q8CA71 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.63■□□□□ 0.57
Shisa4Q8CA71 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa4Q8CA71 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa4Q8CA71 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa4Q8CA71 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa4Q8CA71 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa4Q8CA71 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Dancr-204ENSMUST00000132389 2347 ntBASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Gm9172-201ENSMUST00000212092 954 ntBASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.62■□□□□ 0.57
Shisa4Q8CA71 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shisa4Q8CA71 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shisa4Q8CA71 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Shisa4Q8CA71 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shisa4Q8CA71 Gm8097-201ENSMUST00000117903 829 ntBASIC18.61■□□□□ 0.57
Shisa4Q8CA71 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.61■□□□□ 0.57
Shisa4Q8CA71 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.61■□□□□ 0.57
Shisa4Q8CA71 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.61■□□□□ 0.57
Shisa4Q8CA71 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shisa4Q8CA71 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Shisa4Q8CA71 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shisa4Q8CA71 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shisa4Q8CA71 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shisa4Q8CA71 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shisa4Q8CA71 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shisa4Q8CA71 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Shisa4Q8CA71 Gm11780-201ENSMUST00000136880 516 ntBASIC18.6■□□□□ 0.57
Shisa4Q8CA71 Gm12497-201ENSMUST00000138778 237 ntBASIC18.6■□□□□ 0.57
Shisa4Q8CA71 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Shisa4Q8CA71 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Shisa4Q8CA71 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.6■□□□□ 0.57
Shisa4Q8CA71 Gm18206-201ENSMUST00000207027 926 ntBASIC18.6■□□□□ 0.57
Shisa4Q8CA71 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.6■□□□□ 0.57
Shisa4Q8CA71 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shisa4Q8CA71 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Shisa4Q8CA71 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shisa4Q8CA71 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shisa4Q8CA71 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms