Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Gm13223-201ENSMUST00000118609 747 ntBASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Mir6404-201ENSMUST00000183699 94 ntBASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.32■□□□□ 0.04
Cfap54Q8C6S9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Mir1895-201ENSMUST00000122615 79 ntBASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Gm5177-201ENSMUST00000183092 997 ntBASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cfap54Q8C6S9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Gm43474-201ENSMUST00000196415 774 ntBASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms