Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Col6a6Q8C6K9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Col6a6Q8C6K9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col6a6Q8C6K9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Col6a6Q8C6K9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Gm8344-201ENSMUST00000119813 856 ntBASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Rarb-207ENSMUST00000225921 2756 ntBASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a6Q8C6K9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Gm5186-201ENSMUST00000218781 920 ntBASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a6Q8C6K9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a6Q8C6K9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms