Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Gm12382-201ENSMUST00000122005 922 ntBASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Gm6576-201ENSMUST00000169678 883 ntBASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.5□□□□□ -0.25
Tsen54Q8C2A2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tsen54Q8C2A2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tsen54Q8C2A2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Mir1199-201ENSMUST00000117015 119 ntBASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms