Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Gm21362-201ENSMUST00000194272 928 ntBASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp4r4Q8C0Y0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp4r4Q8C0Y0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ppp4r4Q8C0Y0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ppp4r4Q8C0Y0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Ppp4r4Q8C0Y0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ppp4r4Q8C0Y0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ppp4r4Q8C0Y0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ppp4r4Q8C0Y0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ppp4r4Q8C0Y0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ppp4r4Q8C0Y0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ppp4r4Q8C0Y0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp4r4Q8C0Y0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ppp4r4Q8C0Y0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Ppp4r4Q8C0Y0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ppp4r4Q8C0Y0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.25■□□□□ 0.19
Ppp4r4Q8C0Y0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ppp4r4Q8C0Y0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ppp4r4Q8C0Y0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Ppp4r4Q8C0Y0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ppp4r4Q8C0Y0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ppp4r4Q8C0Y0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.25■□□□□ 0.19
Ppp4r4Q8C0Y0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ppp4r4Q8C0Y0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ppp4r4Q8C0Y0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ppp4r4Q8C0Y0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ppp4r4Q8C0Y0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ppp4r4Q8C0Y0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.25■□□□□ 0.19
Ppp4r4Q8C0Y0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ppp4r4Q8C0Y0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ppp4r4Q8C0Y0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms