Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rd3Q8BRE0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rd3Q8BRE0 Gm11780-201ENSMUST00000136880 516 ntBASIC17.05■□□□□ 0.32
Rd3Q8BRE0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rd3Q8BRE0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.05■□□□□ 0.32
Rd3Q8BRE0 Gm9172-201ENSMUST00000212092 954 ntBASIC17.05■□□□□ 0.32
Rd3Q8BRE0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rd3Q8BRE0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rd3Q8BRE0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rd3Q8BRE0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rd3Q8BRE0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rd3Q8BRE0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rd3Q8BRE0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.05■□□□□ 0.32
Rd3Q8BRE0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rd3Q8BRE0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rd3Q8BRE0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rd3Q8BRE0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 AV026068-213ENSMUST00000223675 1171 ntBASIC17.04■□□□□ 0.32
Rd3Q8BRE0 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rd3Q8BRE0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rd3Q8BRE0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rd3Q8BRE0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rd3Q8BRE0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.03■□□□□ 0.32
Rd3Q8BRE0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rd3Q8BRE0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rd3Q8BRE0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rd3Q8BRE0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.03■□□□□ 0.32
Rd3Q8BRE0 Gm25406-201ENSMUST00000157599 105 ntBASIC17.03■□□□□ 0.32
Rd3Q8BRE0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.03■□□□□ 0.32
Rd3Q8BRE0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rd3Q8BRE0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.03■□□□□ 0.32
Rd3Q8BRE0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rd3Q8BRE0 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.03■□□□□ 0.32
Rd3Q8BRE0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rd3Q8BRE0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Rd3Q8BRE0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rd3Q8BRE0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rd3Q8BRE0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rd3Q8BRE0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Rd3Q8BRE0 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.02■□□□□ 0.32
Rd3Q8BRE0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rd3Q8BRE0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rd3Q8BRE0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
Rd3Q8BRE0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rd3Q8BRE0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.02■□□□□ 0.32
Rd3Q8BRE0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.02■□□□□ 0.32
Rd3Q8BRE0 Gm15467-201ENSMUST00000120582 445 ntBASIC17.02■□□□□ 0.32
Rd3Q8BRE0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.02■□□□□ 0.32
Rd3Q8BRE0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rd3Q8BRE0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rd3Q8BRE0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rd3Q8BRE0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rd3Q8BRE0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Rd3Q8BRE0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rd3Q8BRE0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rd3Q8BRE0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rd3Q8BRE0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rd3Q8BRE0 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.02■□□□□ 0.31
Rd3Q8BRE0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms