Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp1Q8BJQ2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp1Q8BJQ2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp1Q8BJQ2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp1Q8BJQ2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp1Q8BJQ2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.07■□□□□ 0.32
Usp1Q8BJQ2 Gm7506-201ENSMUST00000207758 815 ntBASIC17.07■□□□□ 0.32
Usp1Q8BJQ2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp1Q8BJQ2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp1Q8BJQ2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp1Q8BJQ2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Usp1Q8BJQ2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.07■□□□□ 0.32
Usp1Q8BJQ2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.07■□□□□ 0.32
Usp1Q8BJQ2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp1Q8BJQ2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Gm13418-201ENSMUST00000119097 944 ntBASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Usp1Q8BJQ2 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Gm8000-201ENSMUST00000188378 592 ntBASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Gm36967-201ENSMUST00000193814 266 ntBASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Gm9172-201ENSMUST00000212092 954 ntBASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp1Q8BJQ2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp1Q8BJQ2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 Gm5364-201ENSMUST00000216789 889 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms