Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Gm27011-201ENSMUST00000182352 972 ntBASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Gm10566-201ENSMUST00000086739 996 ntBASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
Chmp2bQ8BJF9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Chmp2bQ8BJF9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Gm7213-201ENSMUST00000215977 950 ntBASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Gm30025-201ENSMUST00000218555 728 ntBASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2bQ8BJF9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms