Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Gm13436-201ENSMUST00000120418 567 ntBASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.55■□□□□ 0.08
Rnf38Q8BI21 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf38Q8BI21 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Gm11336-201ENSMUST00000118168 334 ntBASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Gm13559-201ENSMUST00000120476 863 ntBASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Rnf38Q8BI21 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Gm43799-201ENSMUST00000201845 579 ntBASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rnf38Q8BI21 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms