Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scn3bQ8BHK2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn3bQ8BHK2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Scn3bQ8BHK2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn3bQ8BHK2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn3bQ8BHK2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.02□□□□□ -0.01
Scn3bQ8BHK2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn3bQ8BHK2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn3bQ8BHK2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn3bQ8BHK2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15□□□□□ -0.01
Scn3bQ8BHK2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn3bQ8BHK2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Scn3bQ8BHK2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Scn3bQ8BHK2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15□□□□□ -0.01
Scn3bQ8BHK2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn3bQ8BHK2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15□□□□□ -0.01
Scn3bQ8BHK2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn3bQ8BHK2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn3bQ8BHK2 Gm3807-201ENSMUST00000193520 1168 ntBASIC15□□□□□ -0.01
Scn3bQ8BHK2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn3bQ8BHK2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn3bQ8BHK2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Scn3bQ8BHK2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Scn3bQ8BHK2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Scn3bQ8BHK2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Scn3bQ8BHK2 Gm27528-202ENSMUST00000222916 2012 ntBASIC15□□□□□ -0.01
Scn3bQ8BHK2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Scn3bQ8BHK2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn3bQ8BHK2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15□□□□□ -0.01
Scn3bQ8BHK2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Scn3bQ8BHK2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn3bQ8BHK2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 App-207ENSMUST00000227737 2827 ntBASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scn3bQ8BHK2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scn3bQ8BHK2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn3bQ8BHK2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn3bQ8BHK2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn3bQ8BHK2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scn3bQ8BHK2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scn3bQ8BHK2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn3bQ8BHK2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn3bQ8BHK2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn3bQ8BHK2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scn3bQ8BHK2 Gm27405-201ENSMUST00000184201 112 ntBASIC14.98□□□□□ -0.01
Scn3bQ8BHK2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn3bQ8BHK2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Scn3bQ8BHK2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scn3bQ8BHK2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms