Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Gm27463-201ENSMUST00000183569 57 ntBASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Gm36967-201ENSMUST00000193814 266 ntBASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk3bQ80YF6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Gm11539-201ENSMUST00000119837 557 ntBASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Gm44450-201ENSMUST00000199528 114 ntBASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Gm3375-201ENSMUST00000203929 796 ntBASIC13.61□□□□□ -0.23
Upk3bQ80YF6 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Asic1-205ENSMUST00000228185 1818 ntBASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upk3bQ80YF6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms