Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf40bQ80W14 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.52■□□□□ 0.56
Prpf40bQ80W14 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf40bQ80W14 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf40bQ80W14 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf40bQ80W14 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
Prpf40bQ80W14 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf40bQ80W14 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf40bQ80W14 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
Prpf40bQ80W14 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf40bQ80W14 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf40bQ80W14 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Prpf40bQ80W14 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40bQ80W14 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40bQ80W14 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40bQ80W14 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40bQ80W14 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Prpf40bQ80W14 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40bQ80W14 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Prpf40bQ80W14 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40bQ80W14 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.51■□□□□ 0.55
Prpf40bQ80W14 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40bQ80W14 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40bQ80W14 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40bQ80W14 Gm15173-201ENSMUST00000122049 433 ntBASIC18.51■□□□□ 0.55
Prpf40bQ80W14 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40bQ80W14 Gm29707-201ENSMUST00000196325 491 ntBASIC18.51■□□□□ 0.55
Prpf40bQ80W14 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.51■□□□□ 0.55
Prpf40bQ80W14 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40bQ80W14 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Prpf40bQ80W14 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40bQ80W14 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40bQ80W14 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40bQ80W14 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Gm7230-201ENSMUST00000173026 815 ntBASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf40bQ80W14 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Gm25990-201ENSMUST00000102440 86 ntBASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Gm44450-201ENSMUST00000199528 114 ntBASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms