Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rpap1Q80TE0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Rpap1Q80TE0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rpap1Q80TE0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC24.81■■□□□ 1.56
Rpap1Q80TE0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rpap1Q80TE0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Rpap1Q80TE0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Rpap1Q80TE0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC24.8■■□□□ 1.56
Rpap1Q80TE0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Rpap1Q80TE0 Gm20949-201ENSMUST00000206478 952 ntBASIC24.8■■□□□ 1.56
Rpap1Q80TE0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rpap1Q80TE0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rpap1Q80TE0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rpap1Q80TE0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rpap1Q80TE0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Rpap1Q80TE0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rpap1Q80TE0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Rpap1Q80TE0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rpap1Q80TE0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Rpap1Q80TE0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Rpap1Q80TE0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rpap1Q80TE0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rpap1Q80TE0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rpap1Q80TE0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Rpap1Q80TE0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rpap1Q80TE0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rpap1Q80TE0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rpap1Q80TE0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Rpap1Q80TE0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Rpap1Q80TE0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Rpap1Q80TE0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rpap1Q80TE0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rpap1Q80TE0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC24.79■■□□□ 1.56
Rpap1Q80TE0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC24.78■■□□□ 1.56
Rpap1Q80TE0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC24.78■■□□□ 1.56
Rpap1Q80TE0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rpap1Q80TE0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC24.78■■□□□ 1.56
Rpap1Q80TE0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Rpap1Q80TE0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC24.78■■□□□ 1.56
Rpap1Q80TE0 Gm5898-201ENSMUST00000121016 2071 ntBASIC24.78■■□□□ 1.56
Rpap1Q80TE0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rpap1Q80TE0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rpap1Q80TE0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC24.78■■□□□ 1.56
Rpap1Q80TE0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
Rpap1Q80TE0 Mir7036b-201ENSMUST00000184791 63 ntBASIC24.78■■□□□ 1.56
Rpap1Q80TE0 AC151836.1-202ENSMUST00000226259 753 ntBASIC24.78■■□□□ 1.56
Rpap1Q80TE0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rpap1Q80TE0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Rpap1Q80TE0 Gm36858-201ENSMUST00000194501 2391 ntBASIC24.77■■□□□ 1.56
Rpap1Q80TE0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rpap1Q80TE0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rpap1Q80TE0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
Rpap1Q80TE0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rpap1Q80TE0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC24.77■■□□□ 1.56
Rpap1Q80TE0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC24.77■■□□□ 1.56
Rpap1Q80TE0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC24.77■■□□□ 1.56
Rpap1Q80TE0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC24.77■■□□□ 1.56
Rpap1Q80TE0 AC127302.2-201ENSMUST00000215212 268 ntBASIC24.77■■□□□ 1.56
Rpap1Q80TE0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC24.77■■□□□ 1.56
Rpap1Q80TE0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Rpap1Q80TE0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Rpap1Q80TE0 Nrn1-204ENSMUST00000224323 1779 ntBASIC24.76■■□□□ 1.55
Rpap1Q80TE0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
Rpap1Q80TE0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC24.76■■□□□ 1.55
Rpap1Q80TE0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rpap1Q80TE0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rpap1Q80TE0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rpap1Q80TE0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Rpap1Q80TE0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Rpap1Q80TE0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC24.76■■□□□ 1.55
Rpap1Q80TE0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC24.76■■□□□ 1.55
Rpap1Q80TE0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rpap1Q80TE0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rpap1Q80TE0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC24.75■■□□□ 1.55
Rpap1Q80TE0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rpap1Q80TE0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC24.75■■□□□ 1.55
Rpap1Q80TE0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rpap1Q80TE0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rpap1Q80TE0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rpap1Q80TE0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Rpap1Q80TE0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rpap1Q80TE0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rpap1Q80TE0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rpap1Q80TE0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rpap1Q80TE0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC24.74■■□□□ 1.55
Rpap1Q80TE0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Rpap1Q80TE0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rpap1Q80TE0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC24.74■■□□□ 1.55
Rpap1Q80TE0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rpap1Q80TE0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Rpap1Q80TE0 Gm25948-201ENSMUST00000175334 112 ntBASIC24.74■■□□□ 1.55
Rpap1Q80TE0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rpap1Q80TE0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC24.74■■□□□ 1.55
Rpap1Q80TE0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rpap1Q80TE0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Rpap1Q80TE0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rpap1Q80TE0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Rpap1Q80TE0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rpap1Q80TE0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rpap1Q80TE0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms