Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Gm15173-201ENSMUST00000122049 433 ntBASIC14.82□□□□□ -0.04
Pif1Q80SX8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.82□□□□□ -0.04
Pif1Q80SX8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.81□□□□□ -0.04
Pif1Q80SX8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Gm7230-201ENSMUST00000173026 815 ntBASIC14.81□□□□□ -0.04
Pif1Q80SX8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.81□□□□□ -0.04
Pif1Q80SX8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pif1Q80SX8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Gm43868-201ENSMUST00000205187 2114 ntBASIC14.81□□□□□ -0.04
Pif1Q80SX8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pif1Q80SX8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.81□□□□□ -0.04
Pif1Q80SX8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Dancr-204ENSMUST00000132389 2347 ntBASIC14.8□□□□□ -0.04
Pif1Q80SX8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pif1Q80SX8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pif1Q80SX8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pif1Q80SX8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.79□□□□□ -0.04
Pif1Q80SX8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.79□□□□□ -0.04
Pif1Q80SX8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Gm5264-201ENSMUST00000190584 848 ntBASIC14.79□□□□□ -0.04
Pif1Q80SX8 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.79□□□□□ -0.04
Pif1Q80SX8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.79□□□□□ -0.04
Pif1Q80SX8 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.79□□□□□ -0.04
Pif1Q80SX8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms