Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Sh3d21Q7TSG5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.64■□□□□ 0.41
Sh3d21Q7TSG5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d21Q7TSG5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d21Q7TSG5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d21Q7TSG5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.64■□□□□ 0.41
Sh3d21Q7TSG5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d21Q7TSG5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d21Q7TSG5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d21Q7TSG5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sh3d21Q7TSG5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d21Q7TSG5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d21Q7TSG5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d21Q7TSG5 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d21Q7TSG5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d21Q7TSG5 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.63■□□□□ 0.41
Sh3d21Q7TSG5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d21Q7TSG5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d21Q7TSG5 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d21Q7TSG5 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d21Q7TSG5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Sh3d21Q7TSG5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.63■□□□□ 0.41
Sh3d21Q7TSG5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d21Q7TSG5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d21Q7TSG5 Gm44430-201ENSMUST00000203376 995 ntBASIC17.63■□□□□ 0.41
Sh3d21Q7TSG5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d21Q7TSG5 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d21Q7TSG5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d21Q7TSG5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d21Q7TSG5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d21Q7TSG5 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d21Q7TSG5 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Gm45328-201ENSMUST00000210942 917 ntBASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3d21Q7TSG5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3d21Q7TSG5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3d21Q7TSG5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3d21Q7TSG5 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3d21Q7TSG5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3d21Q7TSG5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3d21Q7TSG5 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Sh3d21Q7TSG5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sh3d21Q7TSG5 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3d21Q7TSG5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sh3d21Q7TSG5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sh3d21Q7TSG5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3d21Q7TSG5 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3d21Q7TSG5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3d21Q7TSG5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3d21Q7TSG5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms